Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scarf1Q5ND28 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scarf1Q5ND28 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.1■□□□□ 0.81
Scarf1Q5ND28 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Scarf1Q5ND28 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Scarf1Q5ND28 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.09■□□□□ 0.81
Scarf1Q5ND28 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.09■□□□□ 0.81
Scarf1Q5ND28 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.09■□□□□ 0.81
Scarf1Q5ND28 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scarf1Q5ND28 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scarf1Q5ND28 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.09■□□□□ 0.81
Scarf1Q5ND28 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.09■□□□□ 0.81
Scarf1Q5ND28 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scarf1Q5ND28 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scarf1Q5ND28 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scarf1Q5ND28 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Gm2399-201ENSMUST00000104944 225 ntBASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Gm12896-201ENSMUST00000118430 226 ntBASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Gm10653-202ENSMUST00000139570 835 ntBASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.08■□□□□ 0.81
Scarf1Q5ND28 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Gm27011-201ENSMUST00000182352 972 ntBASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scarf1Q5ND28 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scarf1Q5ND28 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scarf1Q5ND28 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scarf1Q5ND28 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scarf1Q5ND28 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scarf1Q5ND28 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scarf1Q5ND28 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Dio3-201ENSMUST00000097228 1449 ntBASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scarf1Q5ND28 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Gm27275-201ENSMUST00000184318 272 ntBASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scarf1Q5ND28 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Gm37856-201ENSMUST00000191634 999 ntBASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Gm2559-201ENSMUST00000201323 363 ntBASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.05■□□□□ 0.8
Scarf1Q5ND28 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scarf1Q5ND28 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Scarf1Q5ND28 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.03■□□□□ 0.8
Scarf1Q5ND28 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scarf1Q5ND28 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scarf1Q5ND28 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scarf1Q5ND28 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.03■□□□□ 0.8
Scarf1Q5ND28 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scarf1Q5ND28 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 258.5 ms