Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clhc1Q5M6W3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clhc1Q5M6W3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clhc1Q5M6W3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Gm6139-201ENSMUST00000079261 882 ntBASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clhc1Q5M6W3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Clhc1Q5M6W3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Clhc1Q5M6W3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clhc1Q5M6W3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clhc1Q5M6W3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clhc1Q5M6W3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.63■□□□□ 0.41
Clhc1Q5M6W3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clhc1Q5M6W3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clhc1Q5M6W3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms