Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.63■□□□□ 0.89
Usp13Q5BKP2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp13Q5BKP2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp13Q5BKP2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp13Q5BKP2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp13Q5BKP2 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Gm22240-201ENSMUST00000175225 82 ntBASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Usp13Q5BKP2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Gm7290-201ENSMUST00000104990 617 ntBASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Gm12918-201ENSMUST00000120234 636 ntBASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Gm15710-201ENSMUST00000121821 636 ntBASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Gm5075-201ENSMUST00000196916 622 ntBASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp13Q5BKP2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Gm12527-201ENSMUST00000117967 564 ntBASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Gm38205-201ENSMUST00000192243 258 ntBASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp13Q5BKP2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Gm13148-201ENSMUST00000118892 745 ntBASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Usp13Q5BKP2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp13Q5BKP2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp13Q5BKP2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Usp13Q5BKP2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Usp13Q5BKP2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Usp13Q5BKP2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp13Q5BKP2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp13Q5BKP2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Usp13Q5BKP2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Gm8520-201ENSMUST00000186517 868 ntBASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Gm6365-201ENSMUST00000054711 744 ntBASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp13Q5BKP2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms