Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
Pds5bQ4VA53 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
Pds5bQ4VA53 Gm32051-202ENSMUST00000197905 2385 ntBASIC32.29■■■□□ 2.76
Pds5bQ4VA53 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Pds5bQ4VA53 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Pds5bQ4VA53 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC32.29■■■□□ 2.76
Pds5bQ4VA53 Gm44544-201ENSMUST00000207052 1844 ntBASIC32.29■■■□□ 2.76
Pds5bQ4VA53 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC32.28■■■□□ 2.76
Pds5bQ4VA53 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC32.28■■■□□ 2.76
Pds5bQ4VA53 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC32.28■■■□□ 2.76
Pds5bQ4VA53 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC32.28■■■□□ 2.76
Pds5bQ4VA53 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC32.28■■■□□ 2.76
Pds5bQ4VA53 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pds5bQ4VA53 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC32.27■■■□□ 2.76
Pds5bQ4VA53 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Pds5bQ4VA53 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Pds5bQ4VA53 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Pds5bQ4VA53 Gm34391-201ENSMUST00000203706 907 ntBASIC32.27■■■□□ 2.76
Pds5bQ4VA53 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Pds5bQ4VA53 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC32.27■■■□□ 2.76
Pds5bQ4VA53 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Pds5bQ4VA53 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
Pds5bQ4VA53 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC32.26■■■□□ 2.76
Pds5bQ4VA53 Spr-ps1-201ENSMUST00000089584 605 ntBASIC32.26■■■□□ 2.76
Pds5bQ4VA53 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
Pds5bQ4VA53 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pds5bQ4VA53 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC32.26■■■□□ 2.75
Pds5bQ4VA53 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pds5bQ4VA53 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pds5bQ4VA53 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC32.26■■■□□ 2.75
Pds5bQ4VA53 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Pds5bQ4VA53 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC32.25■■■□□ 2.75
Pds5bQ4VA53 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
Pds5bQ4VA53 Snhg20-203ENSMUST00000182811 2153 ntBASIC32.25■■■□□ 2.75
Pds5bQ4VA53 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Pds5bQ4VA53 Gm37352-201ENSMUST00000193908 2181 ntBASIC32.25■■■□□ 2.75
Pds5bQ4VA53 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Pds5bQ4VA53 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
Pds5bQ4VA53 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pds5bQ4VA53 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Pds5bQ4VA53 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Pds5bQ4VA53 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Pds5bQ4VA53 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Gm11950-201ENSMUST00000121615 838 ntBASIC32.23■■■□□ 2.75
Pds5bQ4VA53 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Otx2os1-206ENSMUST00000228153 787 ntBASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC32.23■■■□□ 2.75
Pds5bQ4VA53 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pds5bQ4VA53 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pds5bQ4VA53 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Pds5bQ4VA53 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pds5bQ4VA53 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Pds5bQ4VA53 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pds5bQ4VA53 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Pds5bQ4VA53 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC32.2■■■□□ 2.75
Pds5bQ4VA53 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Pds5bQ4VA53 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Pds5bQ4VA53 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC32.2■■■□□ 2.74
Pds5bQ4VA53 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pds5bQ4VA53 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pds5bQ4VA53 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pds5bQ4VA53 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Pds5bQ4VA53 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
Pds5bQ4VA53 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pds5bQ4VA53 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pds5bQ4VA53 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pds5bQ4VA53 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms