Protein–RNA interactions for Protein: Q4V9W2

Srek1ip1, Protein SREK1IP1, mousemouse

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srek1ip1Q4V9W2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Mir3960-201ENSMUST00000198213 73 ntBASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Srek1ip1Q4V9W2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Srek1ip1Q4V9W2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Srek1ip1Q4V9W2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Srek1ip1Q4V9W2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Srek1ip1Q4V9W2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Srek1ip1Q4V9W2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Srek1ip1Q4V9W2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Srek1ip1Q4V9W2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms