Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx49Q4FZF3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Gm13559-201ENSMUST00000120476 863 ntBASIC21.29■■□□□ 1
Ddx49Q4FZF3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.29■■□□□ 1
Ddx49Q4FZF3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.28■■□□□ 1
Ddx49Q4FZF3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Ddx49Q4FZF3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
Ddx49Q4FZF3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx49Q4FZF3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx49Q4FZF3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.27■■□□□ 1
Ddx49Q4FZF3 Gm11539-201ENSMUST00000119837 557 ntBASIC21.27■■□□□ 1
Ddx49Q4FZF3 Gm13436-201ENSMUST00000120418 567 ntBASIC21.27■■□□□ 1
Ddx49Q4FZF3 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.27■■□□□ 1
Ddx49Q4FZF3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ddx49Q4FZF3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx49Q4FZF3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.27■□□□□ 0.99
Ddx49Q4FZF3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Zfp783-201ENSMUST00000095946 670 ntBASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx49Q4FZF3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 Gm7367-201ENSMUST00000057611 492 ntBASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx49Q4FZF3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Gm7889-201ENSMUST00000185591 958 ntBASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Gm42545-201ENSMUST00000202755 922 ntBASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Gm10138-203ENSMUST00000206952 366 ntBASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Gm18025-201ENSMUST00000221733 862 ntBASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx49Q4FZF3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 Gm6659-201ENSMUST00000174752 547 ntBASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx49Q4FZF3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms