Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Gm13158-201ENSMUST00000122007 736 ntBASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Gm18666-201ENSMUST00000190039 958 ntBASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf223Q3UV31 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Zfp783-201ENSMUST00000095946 670 ntBASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.8■□□□□ 0.44
Rnf223Q3UV31 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Mtag2-201ENSMUST00000058665 714 ntBASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf223Q3UV31 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Gm10698-201ENSMUST00000182663 604 ntBASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf223Q3UV31 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf223Q3UV31 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf223Q3UV31 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf223Q3UV31 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.77■□□□□ 0.44
Rnf223Q3UV31 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf223Q3UV31 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf223Q3UV31 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rnf223Q3UV31 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf223Q3UV31 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf223Q3UV31 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf223Q3UV31 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Gm10252-201ENSMUST00000209541 832 ntBASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf223Q3UV31 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Golph3-205ENSMUST00000228671 2842 ntBASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf223Q3UV31 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.75■□□□□ 0.43
Rnf223Q3UV31 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms