Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp30Q3UN04 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp30Q3UN04 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp30Q3UN04 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp30Q3UN04 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Gm38285-201ENSMUST00000192928 922 ntBASIC18.4■□□□□ 0.54
Usp30Q3UN04 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp30Q3UN04 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.4■□□□□ 0.54
Usp30Q3UN04 Gm10138-203ENSMUST00000206952 366 ntBASIC18.4■□□□□ 0.54
Usp30Q3UN04 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp30Q3UN04 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp30Q3UN04 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.39■□□□□ 0.54
Usp30Q3UN04 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.39■□□□□ 0.53
Usp30Q3UN04 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Usp30Q3UN04 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp30Q3UN04 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.38■□□□□ 0.53
Usp30Q3UN04 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.38■□□□□ 0.53
Usp30Q3UN04 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp30Q3UN04 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Mtag2-201ENSMUST00000058665 714 ntBASIC18.37■□□□□ 0.53
Usp30Q3UN04 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp30Q3UN04 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp30Q3UN04 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.36■□□□□ 0.53
Usp30Q3UN04 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.36■□□□□ 0.53
Usp30Q3UN04 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp30Q3UN04 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp30Q3UN04 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp30Q3UN04 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp30Q3UN04 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp30Q3UN04 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp30Q3UN04 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp30Q3UN04 Gm37055-201ENSMUST00000191866 133 ntBASIC18.35■□□□□ 0.53
Usp30Q3UN04 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp30Q3UN04 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp30Q3UN04 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp30Q3UN04 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp30Q3UN04 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp30Q3UN04 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Usp30Q3UN04 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp30Q3UN04 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp30Q3UN04 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp30Q3UN04 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.34■□□□□ 0.53
Usp30Q3UN04 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp30Q3UN04 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms