Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smu1Q3UKJ7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Gm13534-201ENSMUST00000121169 513 ntBASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.59■□□□□ 0.41
Smu1Q3UKJ7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smu1Q3UKJ7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smu1Q3UKJ7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smu1Q3UKJ7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smu1Q3UKJ7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Smu1Q3UKJ7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smu1Q3UKJ7 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smu1Q3UKJ7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.55■□□□□ 0.4
Smu1Q3UKJ7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.54■□□□□ 0.4
Smu1Q3UKJ7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smu1Q3UKJ7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smu1Q3UKJ7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smu1Q3UKJ7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smu1Q3UKJ7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smu1Q3UKJ7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smu1Q3UKJ7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smu1Q3UKJ7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smu1Q3UKJ7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smu1Q3UKJ7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smu1Q3UKJ7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Smu1Q3UKJ7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms