Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col19a1Q0VF58 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.66■□□□□ 0.74
Col19a1Q0VF58 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col19a1Q0VF58 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col19a1Q0VF58 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col19a1Q0VF58 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Col19a1Q0VF58 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col19a1Q0VF58 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col19a1Q0VF58 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.64■□□□□ 0.74
Col19a1Q0VF58 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col19a1Q0VF58 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.64■□□□□ 0.73
Col19a1Q0VF58 Gm38027-201ENSMUST00000192315 235 ntBASIC19.64■□□□□ 0.73
Col19a1Q0VF58 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.64■□□□□ 0.73
Col19a1Q0VF58 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.64■□□□□ 0.73
Col19a1Q0VF58 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col19a1Q0VF58 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col19a1Q0VF58 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col19a1Q0VF58 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.64■□□□□ 0.73
Col19a1Q0VF58 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Gm18669-201ENSMUST00000216049 778 ntBASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col19a1Q0VF58 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Col19a1Q0VF58 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col19a1Q0VF58 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Gm29518-201ENSMUST00000190858 372 ntBASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Mzt1-203ENSMUST00000227948 952 ntBASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col19a1Q0VF58 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col19a1Q0VF58 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col19a1Q0VF58 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.58■□□□□ 0.72
Col19a1Q0VF58 Gm5587-201ENSMUST00000206270 674 ntBASIC19.58■□□□□ 0.72
Col19a1Q0VF58 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms