Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SobpQ0P5V2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SobpQ0P5V2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SobpQ0P5V2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SobpQ0P5V2 Notumos-201ENSMUST00000151998 2659 ntBASIC21.07■□□□□ 0.96
SobpQ0P5V2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SobpQ0P5V2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Gm13474-201ENSMUST00000122466 815 ntBASIC21.06■□□□□ 0.96
SobpQ0P5V2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.06■□□□□ 0.96
SobpQ0P5V2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SobpQ0P5V2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.05■□□□□ 0.96
SobpQ0P5V2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SobpQ0P5V2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Gm18733-201ENSMUST00000173950 856 ntBASIC21.04■□□□□ 0.96
SobpQ0P5V2 Gm27742-201ENSMUST00000184667 60 ntBASIC21.04■□□□□ 0.96
SobpQ0P5V2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SobpQ0P5V2 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.04■□□□□ 0.96
SobpQ0P5V2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Gm11950-201ENSMUST00000121615 838 ntBASIC21.03■□□□□ 0.96
SobpQ0P5V2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SobpQ0P5V2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Gm18206-201ENSMUST00000207027 926 ntBASIC21.02■□□□□ 0.96
SobpQ0P5V2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SobpQ0P5V2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
SobpQ0P5V2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SobpQ0P5V2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.01■□□□□ 0.95
SobpQ0P5V2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.01■□□□□ 0.95
SobpQ0P5V2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SobpQ0P5V2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SobpQ0P5V2 Mir1668-201ENSMUST00000184114 107 ntBASIC21■□□□□ 0.95
SobpQ0P5V2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms