Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx4Q07424 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx4Q07424 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx4Q07424 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx4Q07424 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx4Q07424 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx4Q07424 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdx4Q07424 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Cdx4Q07424 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cdx4Q07424 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.13□□□□□ -0.15
Cdx4Q07424 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cdx4Q07424 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdx4Q07424 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Cdx4Q07424 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdx4Q07424 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Cdx4Q07424 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdx4Q07424 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdx4Q07424 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdx4Q07424 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Cdx4Q07424 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.12□□□□□ -0.15
Cdx4Q07424 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.12□□□□□ -0.15
Cdx4Q07424 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdx4Q07424 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdx4Q07424 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdx4Q07424 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdx4Q07424 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdx4Q07424 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdx4Q07424 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdx4Q07424 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Cdx4Q07424 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cdx4Q07424 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.11□□□□□ -0.15
Cdx4Q07424 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdx4Q07424 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cdx4Q07424 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdx4Q07424 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdx4Q07424 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdx4Q07424 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.1□□□□□ -0.15
Cdx4Q07424 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cdx4Q07424 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Mir5133-201ENSMUST00000174955 77 ntBASIC14.1□□□□□ -0.15
Cdx4Q07424 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdx4Q07424 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx4Q07424 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx4Q07424 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx4Q07424 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdx4Q07424 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdx4Q07424 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx4Q07424 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx4Q07424 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdx4Q07424 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdx4Q07424 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms