Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GabpaQ00422 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GabpaQ00422 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
GabpaQ00422 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.86■□□□□ 0.93
GabpaQ00422 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GabpaQ00422 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GabpaQ00422 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GabpaQ00422 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GabpaQ00422 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GabpaQ00422 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
GabpaQ00422 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GabpaQ00422 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GabpaQ00422 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
GabpaQ00422 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.84■□□□□ 0.93
GabpaQ00422 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.84■□□□□ 0.93
GabpaQ00422 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.84■□□□□ 0.93
GabpaQ00422 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GabpaQ00422 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GabpaQ00422 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GabpaQ00422 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GabpaQ00422 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.83■□□□□ 0.93
GabpaQ00422 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GabpaQ00422 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
GabpaQ00422 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GabpaQ00422 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GabpaQ00422 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
GabpaQ00422 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GabpaQ00422 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GabpaQ00422 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GabpaQ00422 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GabpaQ00422 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
GabpaQ00422 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GabpaQ00422 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GabpaQ00422 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GabpaQ00422 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
GabpaQ00422 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GabpaQ00422 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GabpaQ00422 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GabpaQ00422 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
GabpaQ00422 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GabpaQ00422 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GabpaQ00422 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GabpaQ00422 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.81■□□□□ 0.92
GabpaQ00422 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.81■□□□□ 0.92
GabpaQ00422 Gm10138-203ENSMUST00000206952 366 ntBASIC20.81■□□□□ 0.92
GabpaQ00422 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
GabpaQ00422 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.81■□□□□ 0.92
GabpaQ00422 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GabpaQ00422 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GabpaQ00422 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GabpaQ00422 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
GabpaQ00422 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.8■□□□□ 0.92
GabpaQ00422 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.8■□□□□ 0.92
GabpaQ00422 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GabpaQ00422 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.8■□□□□ 0.92
GabpaQ00422 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
GabpaQ00422 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GabpaQ00422 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.79■□□□□ 0.92
GabpaQ00422 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.79■□□□□ 0.92
GabpaQ00422 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.79■□□□□ 0.92
GabpaQ00422 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GabpaQ00422 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GabpaQ00422 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GabpaQ00422 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GabpaQ00422 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GabpaQ00422 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Gm37055-201ENSMUST00000191866 133 ntBASIC20.78■□□□□ 0.92
GabpaQ00422 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.78■□□□□ 0.92
GabpaQ00422 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.78■□□□□ 0.92
GabpaQ00422 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GabpaQ00422 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GabpaQ00422 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
GabpaQ00422 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GabpaQ00422 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
GabpaQ00422 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.77■□□□□ 0.92
GabpaQ00422 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GabpaQ00422 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GabpaQ00422 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
GabpaQ00422 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GabpaQ00422 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GabpaQ00422 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.77■□□□□ 0.92
GabpaQ00422 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GabpaQ00422 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms