Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smn1P97801 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smn1P97801 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.71■□□□□ 0.11
Smn1P97801 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.71■□□□□ 0.11
Smn1P97801 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.71■□□□□ 0.11
Smn1P97801 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.71■□□□□ 0.11
Smn1P97801 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smn1P97801 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smn1P97801 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smn1P97801 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smn1P97801 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smn1P97801 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smn1P97801 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.7■□□□□ 0.1
Smn1P97801 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Gm11421-201ENSMUST00000122124 294 ntBASIC15.7■□□□□ 0.1
Smn1P97801 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smn1P97801 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smn1P97801 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smn1P97801 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.69■□□□□ 0.1
Smn1P97801 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.69■□□□□ 0.1
Smn1P97801 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.69■□□□□ 0.1
Smn1P97801 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.69■□□□□ 0.1
Smn1P97801 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.69■□□□□ 0.1
Smn1P97801 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smn1P97801 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smn1P97801 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Gm9847-201ENSMUST00000052528 599 ntBASIC15.68■□□□□ 0.1
Smn1P97801 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smn1P97801 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Smn1P97801 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smn1P97801 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.68■□□□□ 0.1
Smn1P97801 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smn1P97801 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smn1P97801 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smn1P97801 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smn1P97801 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smn1P97801 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smn1P97801 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smn1P97801 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smn1P97801 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.67■□□□□ 0.1
Smn1P97801 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smn1P97801 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms