Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC152827.1-201ENSMUST00000221143 2189 ntBASIC12.7□□□□□ -0.38
PrkdcP97313 Gm27357-201ENSMUST00000183754 135 ntBASIC12.7□□□□□ -0.38
PrkdcP97313 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PrkdcP97313 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
PrkdcP97313 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.69□□□□□ -0.38
PrkdcP97313 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
PrkdcP97313 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.69□□□□□ -0.38
PrkdcP97313 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PrkdcP97313 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Mir5130-201ENSMUST00000175160 84 ntBASIC12.69□□□□□ -0.38
PrkdcP97313 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PrkdcP97313 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.69□□□□□ -0.38
PrkdcP97313 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.69□□□□□ -0.38
PrkdcP97313 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.69□□□□□ -0.38
PrkdcP97313 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.68□□□□□ -0.38
PrkdcP97313 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.68□□□□□ -0.38
PrkdcP97313 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.68□□□□□ -0.38
PrkdcP97313 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
PrkdcP97313 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.68□□□□□ -0.38
PrkdcP97313 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PrkdcP97313 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.67□□□□□ -0.38
PrkdcP97313 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PrkdcP97313 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
PrkdcP97313 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PrkdcP97313 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
PrkdcP97313 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
PrkdcP97313 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.67□□□□□ -0.38
PrkdcP97313 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PrkdcP97313 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.67□□□□□ -0.38
PrkdcP97313 Gm27459-201ENSMUST00000184860 107 ntBASIC12.67□□□□□ -0.38
PrkdcP97313 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PrkdcP97313 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PrkdcP97313 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC12.67□□□□□ -0.38
PrkdcP97313 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PrkdcP97313 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PrkdcP97313 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PrkdcP97313 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PrkdcP97313 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PrkdcP97313 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.66□□□□□ -0.38
PrkdcP97313 Gm27463-201ENSMUST00000183569 57 ntBASIC12.66□□□□□ -0.38
PrkdcP97313 Gm27742-201ENSMUST00000184667 60 ntBASIC12.66□□□□□ -0.38
PrkdcP97313 Gm17808-201ENSMUST00000200859 894 ntBASIC12.66□□□□□ -0.38
PrkdcP97313 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PrkdcP97313 Gm12504-201ENSMUST00000120860 2231 ntBASIC12.66□□□□□ -0.38
PrkdcP97313 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PrkdcP97313 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PrkdcP97313 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
PrkdcP97313 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PrkdcP97313 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
PrkdcP97313 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
PrkdcP97313 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.65□□□□□ -0.38
PrkdcP97313 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PrkdcP97313 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrkdcP97313 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
PrkdcP97313 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.64□□□□□ -0.39
PrkdcP97313 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PrkdcP97313 Gm20634-201ENSMUST00000090779 2956 ntBASIC12.64□□□□□ -0.39
PrkdcP97313 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrkdcP97313 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkdcP97313 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrkdcP97313 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC12.64□□□□□ -0.39
PrkdcP97313 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms