Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Trim43bP86448 AV356131-201ENSMUST00000206201 750 ntBASIC18.8■□□□□ 0.6
Trim43bP86448 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Gm9988-201ENSMUST00000069786 435 ntBASIC18.8■□□□□ 0.6
Trim43bP86448 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43bP86448 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43bP86448 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43bP86448 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim43bP86448 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43bP86448 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.79■□□□□ 0.6
Trim43bP86448 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim43bP86448 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim43bP86448 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43bP86448 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim43bP86448 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Trim43bP86448 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim43bP86448 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43bP86448 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43bP86448 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43bP86448 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim43bP86448 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim43bP86448 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim43bP86448 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.78■□□□□ 0.6
Trim43bP86448 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43bP86448 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43bP86448 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim43bP86448 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43bP86448 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43bP86448 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43bP86448 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43bP86448 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43bP86448 Gm13234-201ENSMUST00000120010 747 ntBASIC18.77■□□□□ 0.6
Trim43bP86448 Gm26571-201ENSMUST00000181399 666 ntBASIC18.77■□□□□ 0.6
Trim43bP86448 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim43bP86448 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43bP86448 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43bP86448 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim43bP86448 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trim43bP86448 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim43bP86448 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim43bP86448 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Trim43bP86448 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim43bP86448 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim43bP86448 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim43bP86448 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim43bP86448 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43bP86448 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43bP86448 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim43bP86448 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43bP86448 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim43bP86448 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Trim43bP86448 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim43bP86448 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43bP86448 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43bP86448 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43bP86448 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim43bP86448 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Trim43bP86448 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Trim43bP86448 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.74■□□□□ 0.59
Trim43bP86448 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.74■□□□□ 0.59
Trim43bP86448 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim43bP86448 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim43bP86448 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim43bP86448 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms