Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.17■□□□□ 0.66
Casp4P70343 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Casp4P70343 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casp4P70343 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Casp4P70343 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casp4P70343 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casp4P70343 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Casp4P70343 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Casp4P70343 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casp4P70343 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casp4P70343 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Casp4P70343 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.16■□□□□ 0.66
Casp4P70343 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Casp4P70343 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casp4P70343 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Casp4P70343 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casp4P70343 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casp4P70343 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Casp4P70343 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Casp4P70343 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Casp4P70343 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.15■□□□□ 0.66
Casp4P70343 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.15■□□□□ 0.66
Casp4P70343 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.15■□□□□ 0.66
Casp4P70343 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Casp4P70343 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.14■□□□□ 0.65
Casp4P70343 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.14■□□□□ 0.65
Casp4P70343 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casp4P70343 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Casp4P70343 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Casp4P70343 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.13■□□□□ 0.65
Casp4P70343 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.13■□□□□ 0.65
Casp4P70343 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.13■□□□□ 0.65
Casp4P70343 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casp4P70343 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Casp4P70343 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.13■□□□□ 0.65
Casp4P70343 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casp4P70343 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.12■□□□□ 0.65
Casp4P70343 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casp4P70343 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Casp4P70343 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Casp4P70343 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casp4P70343 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.12■□□□□ 0.65
Casp4P70343 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Casp4P70343 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casp4P70343 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casp4P70343 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.12■□□□□ 0.65
Casp4P70343 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casp4P70343 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Casp4P70343 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casp4P70343 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casp4P70343 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Casp4P70343 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.11■□□□□ 0.65
Casp4P70343 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.11■□□□□ 0.65
Casp4P70343 Gm6420-201ENSMUST00000193885 723 ntBASIC19.11■□□□□ 0.65
Casp4P70343 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casp4P70343 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casp4P70343 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Casp4P70343 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casp4P70343 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casp4P70343 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casp4P70343 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casp4P70343 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Casp4P70343 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casp4P70343 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casp4P70343 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casp4P70343 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casp4P70343 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.1■□□□□ 0.65
Casp4P70343 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casp4P70343 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms