Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdlim4P70271 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.21■□□□□ 0.03
Pdlim4P70271 Gm6365-201ENSMUST00000054711 744 ntBASIC15.21■□□□□ 0.03
Pdlim4P70271 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdlim4P70271 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pdlim4P70271 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim4P70271 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim4P70271 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim4P70271 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim4P70271 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Pdlim4P70271 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdlim4P70271 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pdlim4P70271 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.2■□□□□ 0.02
Pdlim4P70271 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.2■□□□□ 0.02
Pdlim4P70271 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdlim4P70271 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pdlim4P70271 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdlim4P70271 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.19■□□□□ 0.02
Pdlim4P70271 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim4P70271 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim4P70271 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.19■□□□□ 0.02
Pdlim4P70271 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Pdlim4P70271 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pdlim4P70271 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim4P70271 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.19■□□□□ 0.02
Pdlim4P70271 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdlim4P70271 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdlim4P70271 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Gm7290-201ENSMUST00000104990 617 ntBASIC15.18■□□□□ 0.02
Pdlim4P70271 Gm12918-201ENSMUST00000120234 636 ntBASIC15.18■□□□□ 0.02
Pdlim4P70271 Gm15710-201ENSMUST00000121821 636 ntBASIC15.18■□□□□ 0.02
Pdlim4P70271 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim4P70271 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Gm5075-201ENSMUST00000196916 622 ntBASIC15.18■□□□□ 0.02
Pdlim4P70271 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.18■□□□□ 0.02
Pdlim4P70271 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.18■□□□□ 0.02
Pdlim4P70271 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.18■□□□□ 0.02
Pdlim4P70271 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim4P70271 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pdlim4P70271 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdlim4P70271 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim4P70271 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pdlim4P70271 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.17■□□□□ 0.02
Pdlim4P70271 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.17■□□□□ 0.02
Pdlim4P70271 Mir5133-201ENSMUST00000174955 77 ntBASIC15.17■□□□□ 0.02
Pdlim4P70271 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.17■□□□□ 0.02
Pdlim4P70271 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pdlim4P70271 Golph3-205ENSMUST00000228671 2842 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms