Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Six5P70178 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six5P70178 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six5P70178 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Six5P70178 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Six5P70178 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six5P70178 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six5P70178 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six5P70178 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Six5P70178 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six5P70178 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.16■□□□□ 0.34
Six5P70178 Gm6211-202ENSMUST00000167849 925 ntBASIC17.16■□□□□ 0.34
Six5P70178 Gm37179-201ENSMUST00000194862 823 ntBASIC17.16■□□□□ 0.34
Six5P70178 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.16■□□□□ 0.34
Six5P70178 Golph3-205ENSMUST00000228671 2842 ntBASIC17.16■□□□□ 0.34
Six5P70178 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.16■□□□□ 0.34
Six5P70178 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six5P70178 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six5P70178 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six5P70178 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.15■□□□□ 0.34
Six5P70178 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Six5P70178 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.15■□□□□ 0.34
Six5P70178 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Six5P70178 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six5P70178 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Six5P70178 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Six5P70178 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Six5P70178 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six5P70178 Gm22325-201ENSMUST00000158904 308 ntBASIC17.14■□□□□ 0.33
Six5P70178 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.14■□□□□ 0.33
Six5P70178 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six5P70178 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six5P70178 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six5P70178 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.14■□□□□ 0.33
Six5P70178 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six5P70178 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six5P70178 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six5P70178 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six5P70178 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.13■□□□□ 0.33
Six5P70178 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.13■□□□□ 0.33
Six5P70178 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.13■□□□□ 0.33
Six5P70178 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Six5P70178 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.13■□□□□ 0.33
Six5P70178 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six5P70178 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Six5P70178 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Six5P70178 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Six5P70178 Mir5133-201ENSMUST00000174955 77 ntBASIC17.12■□□□□ 0.33
Six5P70178 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.12■□□□□ 0.33
Six5P70178 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.12■□□□□ 0.33
Six5P70178 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Six5P70178 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.12■□□□□ 0.33
Six5P70178 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six5P70178 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Six5P70178 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six5P70178 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Six5P70178 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Six5P70178 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.11■□□□□ 0.33
Six5P70178 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.11■□□□□ 0.33
Six5P70178 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Six5P70178 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms