Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.12■□□□□ 0.49
Crnkl1P63154 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Crnkl1P63154 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Crnkl1P63154 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.12■□□□□ 0.49
Crnkl1P63154 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Crnkl1P63154 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crnkl1P63154 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.11■□□□□ 0.49
Crnkl1P63154 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Crnkl1P63154 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.11■□□□□ 0.49
Crnkl1P63154 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.11■□□□□ 0.49
Crnkl1P63154 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.11■□□□□ 0.49
Crnkl1P63154 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Crnkl1P63154 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.11■□□□□ 0.49
Crnkl1P63154 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Crnkl1P63154 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Crnkl1P63154 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.1■□□□□ 0.49
Crnkl1P63154 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Gm27454-201ENSMUST00000185090 204 ntBASIC18.1■□□□□ 0.49
Crnkl1P63154 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Crnkl1P63154 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crnkl1P63154 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.09■□□□□ 0.49
Crnkl1P63154 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.09■□□□□ 0.49
Crnkl1P63154 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crnkl1P63154 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Crnkl1P63154 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.08■□□□□ 0.49
Crnkl1P63154 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Crnkl1P63154 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Crnkl1P63154 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Crnkl1P63154 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Crnkl1P63154 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Crnkl1P63154 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Crnkl1P63154 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Crnkl1P63154 Gm43137-201ENSMUST00000198052 594 ntBASIC18.08■□□□□ 0.48
Crnkl1P63154 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Crnkl1P63154 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Crnkl1P63154 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Crnkl1P63154 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Crnkl1P63154 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Crnkl1P63154 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Crnkl1P63154 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Crnkl1P63154 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Crnkl1P63154 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Crnkl1P63154 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Crnkl1P63154 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Crnkl1P63154 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.07■□□□□ 0.48
Crnkl1P63154 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Crnkl1P63154 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Crnkl1P63154 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Crnkl1P63154 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Crnkl1P63154 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Crnkl1P63154 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crnkl1P63154 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms