Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cks1bP61025 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Cks1bP61025 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.04□□□□□ -0.32
Cks1bP61025 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.04□□□□□ -0.32
Cks1bP61025 Gm9870-201ENSMUST00000063874 645 ntBASIC13.04□□□□□ -0.32
Cks1bP61025 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cks1bP61025 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.04□□□□□ -0.32
Cks1bP61025 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cks1bP61025 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cks1bP61025 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.03□□□□□ -0.32
Cks1bP61025 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cks1bP61025 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.03□□□□□ -0.32
Cks1bP61025 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.03□□□□□ -0.32
Cks1bP61025 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cks1bP61025 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cks1bP61025 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cks1bP61025 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.03□□□□□ -0.32
Cks1bP61025 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cks1bP61025 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cks1bP61025 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cks1bP61025 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.02□□□□□ -0.33
Cks1bP61025 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cks1bP61025 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.02□□□□□ -0.33
Cks1bP61025 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cks1bP61025 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cks1bP61025 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.01□□□□□ -0.33
Cks1bP61025 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cks1bP61025 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cks1bP61025 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.01□□□□□ -0.33
Cks1bP61025 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.01□□□□□ -0.33
Cks1bP61025 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.01□□□□□ -0.33
Cks1bP61025 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.01□□□□□ -0.33
Cks1bP61025 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cks1bP61025 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms