Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tpm1P58771 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tpm1P58771 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tpm1P58771 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
Tpm1P58771 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Tpm1P58771 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Tpm1P58771 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.43■□□□□ 0.86
Tpm1P58771 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.43■□□□□ 0.86
Tpm1P58771 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tpm1P58771 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tpm1P58771 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm1P58771 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.42■□□□□ 0.86
Tpm1P58771 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tpm1P58771 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm1P58771 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm1P58771 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Tpm1P58771 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tpm1P58771 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Tpm1P58771 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Tpm1P58771 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm1P58771 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm1P58771 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.41■□□□□ 0.86
Tpm1P58771 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.41■□□□□ 0.86
Tpm1P58771 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm1P58771 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.41■□□□□ 0.86
Tpm1P58771 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm1P58771 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
Tpm1P58771 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Tpm1P58771 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tpm1P58771 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm1P58771 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm1P58771 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm1P58771 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm1P58771 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.4■□□□□ 0.86
Tpm1P58771 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm1P58771 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Tpm1P58771 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tpm1P58771 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.39■□□□□ 0.86
Tpm1P58771 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tpm1P58771 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tpm1P58771 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tpm1P58771 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Tpm1P58771 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.39■□□□□ 0.85
Tpm1P58771 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Tpm1P58771 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm1P58771 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm1P58771 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm1P58771 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Tpm1P58771 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm1P58771 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.38■□□□□ 0.85
Tpm1P58771 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm1P58771 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm1P58771 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm1P58771 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.37■□□□□ 0.85
Tpm1P58771 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Gm7860-201ENSMUST00000121190 879 ntBASIC20.37■□□□□ 0.85
Tpm1P58771 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.37■□□□□ 0.85
Tpm1P58771 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm1P58771 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms