Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdsp1P58466 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.41□□□□□ -0.1
Ctdsp1P58466 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Gm16437-201ENSMUST00000025669 507 ntBASIC14.41□□□□□ -0.1
Ctdsp1P58466 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdsp1P58466 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.4□□□□□ -0.1
Ctdsp1P58466 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.4□□□□□ -0.1
Ctdsp1P58466 Gm9806-201ENSMUST00000051080 552 ntBASIC14.4□□□□□ -0.1
Ctdsp1P58466 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ctdsp1P58466 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ctdsp1P58466 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.39□□□□□ -0.11
Ctdsp1P58466 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.38□□□□□ -0.11
Ctdsp1P58466 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ctdsp1P58466 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ctdsp1P58466 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.37□□□□□ -0.11
Ctdsp1P58466 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Scarna2-201ENSMUST00000157560 414 ntBASIC14.37□□□□□ -0.11
Ctdsp1P58466 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ctdsp1P58466 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.36□□□□□ -0.11
Ctdsp1P58466 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ctdsp1P58466 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms