Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SmoP56726 Golph3-205ENSMUST00000228671 2842 ntBASIC18.45■□□□□ 0.54
SmoP56726 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SmoP56726 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Gm13168-201ENSMUST00000121771 632 ntBASIC18.45■□□□□ 0.54
SmoP56726 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.45■□□□□ 0.54
SmoP56726 Gm8520-201ENSMUST00000186517 868 ntBASIC18.45■□□□□ 0.54
SmoP56726 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SmoP56726 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.45■□□□□ 0.54
SmoP56726 Flg-201ENSMUST00000050758 1488 ntBASIC18.45■□□□□ 0.54
SmoP56726 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SmoP56726 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SmoP56726 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SmoP56726 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SmoP56726 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SmoP56726 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SmoP56726 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SmoP56726 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SmoP56726 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.44■□□□□ 0.54
SmoP56726 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SmoP56726 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.44■□□□□ 0.54
SmoP56726 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SmoP56726 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.43■□□□□ 0.54
SmoP56726 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SmoP56726 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SmoP56726 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SmoP56726 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SmoP56726 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SmoP56726 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.43■□□□□ 0.54
SmoP56726 Gm11927-201ENSMUST00000118472 759 ntBASIC18.43■□□□□ 0.54
SmoP56726 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SmoP56726 Gm22240-201ENSMUST00000175225 82 ntBASIC18.43■□□□□ 0.54
SmoP56726 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SmoP56726 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.43■□□□□ 0.54
SmoP56726 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SmoP56726 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SmoP56726 Iqck-206ENSMUST00000208658 2891 ntBASIC18.43■□□□□ 0.54
SmoP56726 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SmoP56726 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SmoP56726 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SmoP56726 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SmoP56726 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SmoP56726 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SmoP56726 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SmoP56726 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.41■□□□□ 0.54
SmoP56726 Zfp783-201ENSMUST00000095946 670 ntBASIC18.41■□□□□ 0.54
SmoP56726 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SmoP56726 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SmoP56726 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SmoP56726 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.41■□□□□ 0.54
SmoP56726 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SmoP56726 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SmoP56726 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SmoP56726 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SmoP56726 Gm5643-201ENSMUST00000117081 966 ntBASIC18.4■□□□□ 0.54
SmoP56726 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SmoP56726 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SmoP56726 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SmoP56726 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SmoP56726 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.4■□□□□ 0.54
SmoP56726 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.4■□□□□ 0.54
SmoP56726 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SmoP56726 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SmoP56726 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SmoP56726 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SmoP56726 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SmoP56726 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.39■□□□□ 0.53
SmoP56726 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.39■□□□□ 0.53
SmoP56726 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SmoP56726 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SmoP56726 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms