Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdh5P55284 Gm10849-201ENSMUST00000100397 618 ntBASIC17.81■□□□□ 0.44
Cdh5P55284 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdh5P55284 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdh5P55284 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh5P55284 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh5P55284 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
Cdh5P55284 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh5P55284 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.8■□□□□ 0.44
Cdh5P55284 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdh5P55284 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.8■□□□□ 0.44
Cdh5P55284 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.8■□□□□ 0.44
Cdh5P55284 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdh5P55284 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh5P55284 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdh5P55284 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdh5P55284 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdh5P55284 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdh5P55284 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Cdh5P55284 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.79■□□□□ 0.44
Cdh5P55284 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.79■□□□□ 0.44
Cdh5P55284 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.79■□□□□ 0.44
Cdh5P55284 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh5P55284 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cdh5P55284 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh5P55284 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh5P55284 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh5P55284 Gm13234-201ENSMUST00000120010 747 ntBASIC17.78■□□□□ 0.44
Cdh5P55284 Gm29257-201ENSMUST00000186115 639 ntBASIC17.78■□□□□ 0.44
Cdh5P55284 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh5P55284 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cdh5P55284 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh5P55284 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cdh5P55284 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh5P55284 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh5P55284 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh5P55284 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh5P55284 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh5P55284 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh5P55284 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh5P55284 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh5P55284 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.77■□□□□ 0.44
Cdh5P55284 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.77■□□□□ 0.44
Cdh5P55284 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.77■□□□□ 0.44
Cdh5P55284 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh5P55284 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Cdh5P55284 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh5P55284 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh5P55284 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cdh5P55284 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh5P55284 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.76■□□□□ 0.43
Cdh5P55284 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.76■□□□□ 0.43
Cdh5P55284 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh5P55284 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cdh5P55284 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh5P55284 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cdh5P55284 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh5P55284 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Cdh5P55284 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Cdh5P55284 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cdh5P55284 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.75■□□□□ 0.43
Cdh5P55284 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh5P55284 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms