Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Gm37292-201ENSMUST00000192062 758 ntBASIC20.49■□□□□ 0.87
Hmgcs2P54869 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Gm30025-201ENSMUST00000218555 728 ntBASIC20.49■□□□□ 0.87
Hmgcs2P54869 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcs2P54869 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.48■□□□□ 0.87
Hmgcs2P54869 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcs2P54869 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcs2P54869 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcs2P54869 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hmgcs2P54869 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcs2P54869 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hmgcs2P54869 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmgcs2P54869 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs2P54869 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs2P54869 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs2P54869 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs2P54869 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmgcs2P54869 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.46■□□□□ 0.87
Hmgcs2P54869 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.46■□□□□ 0.87
Hmgcs2P54869 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.45■□□□□ 0.86
Hmgcs2P54869 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.45■□□□□ 0.86
Hmgcs2P54869 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.45■□□□□ 0.86
Hmgcs2P54869 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmgcs2P54869 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.44■□□□□ 0.86
Hmgcs2P54869 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmgcs2P54869 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Gm12382-201ENSMUST00000122005 922 ntBASIC20.43■□□□□ 0.86
Hmgcs2P54869 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.43■□□□□ 0.86
Hmgcs2P54869 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgcs2P54869 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgcs2P54869 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgcs2P54869 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Hmgcs2P54869 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.42■□□□□ 0.86
Hmgcs2P54869 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgcs2P54869 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.42■□□□□ 0.86
Hmgcs2P54869 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgcs2P54869 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.42■□□□□ 0.86
Hmgcs2P54869 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms