Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nub1P54729 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nub1P54729 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nub1P54729 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nub1P54729 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nub1P54729 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.71■□□□□ 0.75
Nub1P54729 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nub1P54729 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Nub1P54729 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nub1P54729 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.71■□□□□ 0.75
Nub1P54729 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Nub1P54729 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nub1P54729 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Nub1P54729 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nub1P54729 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nub1P54729 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.7■□□□□ 0.74
Nub1P54729 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.7■□□□□ 0.74
Nub1P54729 Gm12933-201ENSMUST00000120203 872 ntBASIC19.7■□□□□ 0.74
Nub1P54729 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 Gm6211-202ENSMUST00000167849 925 ntBASIC19.7■□□□□ 0.74
Nub1P54729 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.7■□□□□ 0.74
Nub1P54729 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nub1P54729 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 Mir5133-201ENSMUST00000174955 77 ntBASIC19.69■□□□□ 0.74
Nub1P54729 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nub1P54729 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.69■□□□□ 0.74
Nub1P54729 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nub1P54729 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Nub1P54729 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.68■□□□□ 0.74
Nub1P54729 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Nub1P54729 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.68■□□□□ 0.74
Nub1P54729 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nub1P54729 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Nub1P54729 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.67■□□□□ 0.74
Nub1P54729 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nub1P54729 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nub1P54729 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nub1P54729 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.67■□□□□ 0.74
Nub1P54729 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nub1P54729 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nub1P54729 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.66■□□□□ 0.74
Nub1P54729 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nub1P54729 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nub1P54729 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nub1P54729 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nub1P54729 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nub1P54729 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nub1P54729 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Nub1P54729 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.65■□□□□ 0.74
Nub1P54729 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.65■□□□□ 0.74
Nub1P54729 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Nub1P54729 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.65■□□□□ 0.74
Nub1P54729 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nub1P54729 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nub1P54729 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nub1P54729 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nub1P54729 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Nub1P54729 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms