Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox3P53784 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sox3P53784 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.48■□□□□ 0.39
Sox3P53784 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.48■□□□□ 0.39
Sox3P53784 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.48■□□□□ 0.39
Sox3P53784 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox3P53784 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox3P53784 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox3P53784 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox3P53784 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox3P53784 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox3P53784 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox3P53784 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.47■□□□□ 0.39
Sox3P53784 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.47■□□□□ 0.39
Sox3P53784 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox3P53784 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox3P53784 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox3P53784 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sox3P53784 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox3P53784 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.46■□□□□ 0.39
Sox3P53784 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox3P53784 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox3P53784 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Sox3P53784 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox3P53784 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.46■□□□□ 0.39
Sox3P53784 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.45■□□□□ 0.38
Sox3P53784 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox3P53784 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox3P53784 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.45■□□□□ 0.38
Sox3P53784 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Sox3P53784 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox3P53784 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.45■□□□□ 0.38
Sox3P53784 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox3P53784 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox3P53784 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox3P53784 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.45■□□□□ 0.38
Sox3P53784 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox3P53784 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.44■□□□□ 0.38
Sox3P53784 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.44■□□□□ 0.38
Sox3P53784 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Gm9987-201ENSMUST00000069768 567 ntBASIC17.44■□□□□ 0.38
Sox3P53784 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox3P53784 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.44■□□□□ 0.38
Sox3P53784 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.44■□□□□ 0.38
Sox3P53784 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox3P53784 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sox3P53784 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Gm37055-201ENSMUST00000191866 133 ntBASIC17.43■□□□□ 0.38
Sox3P53784 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.43■□□□□ 0.38
Sox3P53784 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.43■□□□□ 0.38
Sox3P53784 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Sox3P53784 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox3P53784 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.42■□□□□ 0.38
Sox3P53784 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sox3P53784 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox3P53784 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms