Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Krt6aP50446 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Krt6aP50446 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Krt6aP50446 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Krt6aP50446 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Krt6aP50446 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Krt6aP50446 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Krt6aP50446 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.21■□□□□ 0.51
Krt6aP50446 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Krt6aP50446 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.21■□□□□ 0.51
Krt6aP50446 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Krt6aP50446 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Krt6aP50446 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Krt6aP50446 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt6aP50446 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Krt6aP50446 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt6aP50446 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt6aP50446 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.2■□□□□ 0.5
Krt6aP50446 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Krt6aP50446 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt6aP50446 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Krt6aP50446 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Krt6aP50446 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt6aP50446 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Krt6aP50446 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Krt6aP50446 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Krt6aP50446 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.19■□□□□ 0.5
Krt6aP50446 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
Krt6aP50446 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.19■□□□□ 0.5
Krt6aP50446 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.19■□□□□ 0.5
Krt6aP50446 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Krt6aP50446 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Krt6aP50446 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Krt6aP50446 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Krt6aP50446 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.18■□□□□ 0.5
Krt6aP50446 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.18■□□□□ 0.5
Krt6aP50446 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.18■□□□□ 0.5
Krt6aP50446 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.18■□□□□ 0.5
Krt6aP50446 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.18■□□□□ 0.5
Krt6aP50446 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Krt6aP50446 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt6aP50446 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.17■□□□□ 0.5
Krt6aP50446 Fst-202ENSMUST00000223640 2612 ntBASIC18.17■□□□□ 0.5
Krt6aP50446 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt6aP50446 Gm43017-201ENSMUST00000198296 752 ntBASIC18.17■□□□□ 0.5
Krt6aP50446 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.17■□□□□ 0.5
Krt6aP50446 Gm45417-201ENSMUST00000209533 758 ntBASIC18.17■□□□□ 0.5
Krt6aP50446 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Krt6aP50446 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt6aP50446 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Krt6aP50446 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Krt6aP50446 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Krt6aP50446 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt6aP50446 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.17■□□□□ 0.5
Krt6aP50446 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Krt6aP50446 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Krt6aP50446 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt6aP50446 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Krt6aP50446 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt6aP50446 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt6aP50446 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.16■□□□□ 0.5
Krt6aP50446 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Krt6aP50446 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Krt6aP50446 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Krt6aP50446 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.16■□□□□ 0.5
Krt6aP50446 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt6aP50446 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Krt6aP50446 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.15■□□□□ 0.5
Krt6aP50446 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.15■□□□□ 0.5
Krt6aP50446 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.15■□□□□ 0.5
Krt6aP50446 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.15■□□□□ 0.5
Krt6aP50446 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.15■□□□□ 0.5
Krt6aP50446 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Krt6aP50446 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Krt6aP50446 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Krt6aP50446 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms