Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-1P50220 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx2-1P50220 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.18■□□□□ 0.02
Nkx2-1P50220 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.18■□□□□ 0.02
Nkx2-1P50220 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.18■□□□□ 0.02
Nkx2-1P50220 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx2-1P50220 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.17■□□□□ 0.02
Nkx2-1P50220 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx2-1P50220 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.17■□□□□ 0.02
Nkx2-1P50220 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nkx2-1P50220 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkx2-1P50220 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkx2-1P50220 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkx2-1P50220 Gm13241-201ENSMUST00000094493 780 ntBASIC15.14■□□□□ 0.01
Nkx2-1P50220 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms