Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prox1P48437 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prox1P48437 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prox1P48437 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Prox1P48437 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prox1P48437 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prox1P48437 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Gm43137-201ENSMUST00000198052 594 ntBASIC17.56■□□□□ 0.4
Prox1P48437 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.56■□□□□ 0.4
Prox1P48437 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.56■□□□□ 0.4
Prox1P48437 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Prox1P48437 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prox1P48437 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.55■□□□□ 0.4
Prox1P48437 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Prox1P48437 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.55■□□□□ 0.4
Prox1P48437 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.55■□□□□ 0.4
Prox1P48437 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.55■□□□□ 0.4
Prox1P48437 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.55■□□□□ 0.4
Prox1P48437 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prox1P48437 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prox1P48437 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prox1P48437 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prox1P48437 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prox1P48437 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prox1P48437 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Prox1P48437 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Prox1P48437 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prox1P48437 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Prox1P48437 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prox1P48437 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prox1P48437 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prox1P48437 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.53■□□□□ 0.4
Prox1P48437 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prox1P48437 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prox1P48437 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prox1P48437 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prox1P48437 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Prox1P48437 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prox1P48437 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Prox1P48437 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Prox1P48437 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.52■□□□□ 0.4
Prox1P48437 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.52■□□□□ 0.4
Prox1P48437 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.52■□□□□ 0.4
Prox1P48437 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prox1P48437 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prox1P48437 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Prox1P48437 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.52■□□□□ 0.39
Prox1P48437 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prox1P48437 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prox1P48437 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Prox1P48437 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Prox1P48437 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prox1P48437 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prox1P48437 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prox1P48437 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.51■□□□□ 0.39
Prox1P48437 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Prox1P48437 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prox1P48437 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prox1P48437 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prox1P48437 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prox1P48437 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prox1P48437 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
Prox1P48437 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prox1P48437 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prox1P48437 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prox1P48437 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prox1P48437 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prox1P48437 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prox1P48437 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Prox1P48437 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.5■□□□□ 0.39
Prox1P48437 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms