Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sox18P43680 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Gm33142-201ENSMUST00000193913 867 ntBASIC17.55■□□□□ 0.4
Sox18P43680 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.55■□□□□ 0.4
Sox18P43680 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sox18P43680 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox18P43680 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sox18P43680 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox18P43680 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.54■□□□□ 0.4
Sox18P43680 Gm43183-201ENSMUST00000200632 547 ntBASIC17.54■□□□□ 0.4
Sox18P43680 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox18P43680 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sox18P43680 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Sox18P43680 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Gm6345-202ENSMUST00000180900 204 ntBASIC17.53■□□□□ 0.4
Sox18P43680 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.53■□□□□ 0.4
Sox18P43680 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Sox18P43680 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sox18P43680 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox18P43680 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox18P43680 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox18P43680 Gm9103-201ENSMUST00000119371 405 ntBASIC17.52■□□□□ 0.4
Sox18P43680 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.52■□□□□ 0.4
Sox18P43680 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox18P43680 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox18P43680 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sox18P43680 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox18P43680 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox18P43680 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox18P43680 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.52■□□□□ 0.39
Sox18P43680 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sox18P43680 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sox18P43680 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.51■□□□□ 0.39
Sox18P43680 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Gm10013-201ENSMUST00000106074 672 ntBASIC17.51■□□□□ 0.39
Sox18P43680 AA414768-201ENSMUST00000121924 1257 ntBASIC17.51■□□□□ 0.39
Sox18P43680 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sox18P43680 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Sox18P43680 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.51■□□□□ 0.39
Sox18P43680 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sox18P43680 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.5■□□□□ 0.39
Sox18P43680 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Sox18P43680 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sox18P43680 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Sox18P43680 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sox18P43680 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sox18P43680 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox18P43680 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox18P43680 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.49■□□□□ 0.39
Sox18P43680 Gm3375-201ENSMUST00000203929 796 ntBASIC17.49■□□□□ 0.39
Sox18P43680 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox18P43680 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms