Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h1dP43277 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h1dP43277 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h1dP43277 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h1dP43277 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hist1h1dP43277 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Hist1h1dP43277 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hist1h1dP43277 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hist1h1dP43277 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hist1h1dP43277 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hist1h1dP43277 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Hist1h1dP43277 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hist1h1dP43277 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.51■□□□□ 0.07
Hist1h1dP43277 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.51■□□□□ 0.07
Hist1h1dP43277 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist1h1dP43277 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Gm21956-201ENSMUST00000179946 522 ntBASIC15.5■□□□□ 0.07
Hist1h1dP43277 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Gm38205-201ENSMUST00000192243 258 ntBASIC15.5■□□□□ 0.07
Hist1h1dP43277 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hist1h1dP43277 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Hist1h1dP43277 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.49■□□□□ 0.07
Hist1h1dP43277 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.49■□□□□ 0.07
Hist1h1dP43277 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.49■□□□□ 0.07
Hist1h1dP43277 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist1h1dP43277 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.48■□□□□ 0.07
Hist1h1dP43277 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist1h1dP43277 Fst-202ENSMUST00000223640 2612 ntBASIC15.47■□□□□ 0.07
Hist1h1dP43277 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hist1h1dP43277 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist1h1dP43277 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms