Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HttP42859 Mzt1-203ENSMUST00000227948 952 ntBASIC19.8■□□□□ 0.76
HttP42859 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HttP42859 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HttP42859 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HttP42859 Gm24589-201ENSMUST00000116692 94 ntBASIC19.8■□□□□ 0.76
HttP42859 Gm6443-201ENSMUST00000203599 874 ntBASIC19.8■□□□□ 0.76
HttP42859 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HttP42859 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HttP42859 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HttP42859 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HttP42859 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HttP42859 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HttP42859 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
HttP42859 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HttP42859 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HttP42859 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HttP42859 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.78■□□□□ 0.76
HttP42859 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
HttP42859 Gm27463-201ENSMUST00000183569 57 ntBASIC19.78■□□□□ 0.76
HttP42859 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.78■□□□□ 0.76
HttP42859 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HttP42859 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HttP42859 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HttP42859 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.78■□□□□ 0.76
HttP42859 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HttP42859 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HttP42859 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HttP42859 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.78■□□□□ 0.76
HttP42859 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HttP42859 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HttP42859 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HttP42859 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HttP42859 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.77■□□□□ 0.76
HttP42859 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HttP42859 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.77■□□□□ 0.76
HttP42859 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HttP42859 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HttP42859 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.77■□□□□ 0.76
HttP42859 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HttP42859 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
HttP42859 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.77■□□□□ 0.76
HttP42859 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HttP42859 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.77■□□□□ 0.76
HttP42859 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HttP42859 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.77■□□□□ 0.76
HttP42859 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.77■□□□□ 0.76
HttP42859 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HttP42859 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HttP42859 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
HttP42859 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
HttP42859 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.76■□□□□ 0.75
HttP42859 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.76■□□□□ 0.75
HttP42859 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.76■□□□□ 0.75
HttP42859 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.76■□□□□ 0.75
HttP42859 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HttP42859 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.76■□□□□ 0.75
HttP42859 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.76■□□□□ 0.75
HttP42859 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HttP42859 Gm12085-201ENSMUST00000119263 940 ntBASIC19.76■□□□□ 0.75
HttP42859 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HttP42859 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HttP42859 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.75■□□□□ 0.75
HttP42859 Gm38027-201ENSMUST00000192315 235 ntBASIC19.75■□□□□ 0.75
HttP42859 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.75■□□□□ 0.75
HttP42859 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HttP42859 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HttP42859 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HttP42859 Mir6349-201ENSMUST00000184059 97 ntBASIC19.75■□□□□ 0.75
HttP42859 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HttP42859 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HttP42859 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HttP42859 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HttP42859 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HttP42859 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HttP42859 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.74■□□□□ 0.75
HttP42859 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HttP42859 Gm27357-201ENSMUST00000183754 135 ntBASIC19.74■□□□□ 0.75
HttP42859 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HttP42859 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HttP42859 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HttP42859 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HttP42859 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HttP42859 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.74■□□□□ 0.75
HttP42859 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HttP42859 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HttP42859 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HttP42859 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HttP42859 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.73■□□□□ 0.75
HttP42859 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HttP42859 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HttP42859 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms