Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox6P40645 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox6P40645 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sox6P40645 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Sox6P40645 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox6P40645 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox6P40645 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox6P40645 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox6P40645 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox6P40645 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sox6P40645 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.18■□□□□ 0.34
Sox6P40645 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sox6P40645 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Sox6P40645 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sox6P40645 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sox6P40645 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.18■□□□□ 0.34
Sox6P40645 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox6P40645 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sox6P40645 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.17■□□□□ 0.34
Sox6P40645 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox6P40645 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sox6P40645 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sox6P40645 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.16■□□□□ 0.34
Sox6P40645 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.16■□□□□ 0.34
Sox6P40645 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sox6P40645 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sox6P40645 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.16■□□□□ 0.34
Sox6P40645 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox6P40645 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox6P40645 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox6P40645 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sox6P40645 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.15■□□□□ 0.34
Sox6P40645 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.15■□□□□ 0.34
Sox6P40645 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox6P40645 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.15■□□□□ 0.34
Sox6P40645 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.15■□□□□ 0.34
Sox6P40645 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox6P40645 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox6P40645 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox6P40645 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.34
Sox6P40645 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sox6P40645 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Sox6P40645 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox6P40645 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.14■□□□□ 0.33
Sox6P40645 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox6P40645 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox6P40645 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.14■□□□□ 0.33
Sox6P40645 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.14■□□□□ 0.33
Sox6P40645 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms