Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cxcl12P40224 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl12P40224 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.97■□□□□ 0.63
Cxcl12P40224 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl12P40224 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl12P40224 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.97■□□□□ 0.63
Cxcl12P40224 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.97■□□□□ 0.63
Cxcl12P40224 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl12P40224 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Cxcl12P40224 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl12P40224 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl12P40224 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl12P40224 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl12P40224 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl12P40224 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.96■□□□□ 0.63
Cxcl12P40224 Gm22697-201ENSMUST00000175194 63 ntBASIC18.96■□□□□ 0.63
Cxcl12P40224 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.96■□□□□ 0.63
Cxcl12P40224 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.96■□□□□ 0.63
Cxcl12P40224 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl12P40224 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl12P40224 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.95■□□□□ 0.62
Cxcl12P40224 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cxcl12P40224 Gm12085-201ENSMUST00000119263 940 ntBASIC18.95■□□□□ 0.62
Cxcl12P40224 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.95■□□□□ 0.62
Cxcl12P40224 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.95■□□□□ 0.62
Cxcl12P40224 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.95■□□□□ 0.62
Cxcl12P40224 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl12P40224 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl12P40224 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Cxcl12P40224 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl12P40224 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.94■□□□□ 0.62
Cxcl12P40224 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cxcl12P40224 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl12P40224 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cxcl12P40224 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl12P40224 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl12P40224 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl12P40224 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl12P40224 Gm7284-201ENSMUST00000131667 944 ntBASIC18.93■□□□□ 0.62
Cxcl12P40224 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl12P40224 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.93■□□□□ 0.62
Cxcl12P40224 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl12P40224 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.93■□□□□ 0.62
Cxcl12P40224 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl12P40224 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl12P40224 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.93■□□□□ 0.62
Cxcl12P40224 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl12P40224 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl12P40224 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
Cxcl12P40224 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl12P40224 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cxcl12P40224 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cxcl12P40224 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.92■□□□□ 0.62
Cxcl12P40224 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cxcl12P40224 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl12P40224 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl12P40224 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl12P40224 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cxcl12P40224 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl12P40224 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cxcl12P40224 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl12P40224 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl12P40224 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl12P40224 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl12P40224 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl12P40224 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl12P40224 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl12P40224 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl12P40224 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl12P40224 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms