Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox5P35710 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox5P35710 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox5P35710 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.02■□□□□ 0.8
Sox5P35710 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox5P35710 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox5P35710 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox5P35710 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.02■□□□□ 0.8
Sox5P35710 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox5P35710 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.02■□□□□ 0.8
Sox5P35710 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sox5P35710 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sox5P35710 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sox5P35710 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.01■□□□□ 0.79
Sox5P35710 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox5P35710 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Sox5P35710 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sox5P35710 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Gm43060-201ENSMUST00000200621 289 ntBASIC20■□□□□ 0.79
Sox5P35710 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sox5P35710 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.99■□□□□ 0.79
Sox5P35710 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Sox5P35710 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.99■□□□□ 0.79
Sox5P35710 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox5P35710 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sox5P35710 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sox5P35710 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox5P35710 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Sox5P35710 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox5P35710 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sox5P35710 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox5P35710 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox5P35710 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.99■□□□□ 0.79
Sox5P35710 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.99■□□□□ 0.79
Sox5P35710 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox5P35710 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox5P35710 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox5P35710 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox5P35710 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sox5P35710 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox5P35710 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox5P35710 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox5P35710 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox5P35710 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sox5P35710 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.97■□□□□ 0.79
Sox5P35710 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 Gm13146-201ENSMUST00000118508 780 ntBASIC19.97■□□□□ 0.79
Sox5P35710 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.97■□□□□ 0.79
Sox5P35710 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox5P35710 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Sox5P35710 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox5P35710 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox5P35710 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Sox5P35710 Tgds-204ENSMUST00000228543 1594 ntBASIC19.96■□□□□ 0.79
Sox5P35710 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Sox5P35710 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.96■□□□□ 0.79
Sox5P35710 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.96■□□□□ 0.79
Sox5P35710 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox5P35710 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Sox5P35710 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox5P35710 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox5P35710 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox5P35710 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox5P35710 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.95■□□□□ 0.78
Sox5P35710 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox5P35710 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox5P35710 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox5P35710 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.95■□□□□ 0.78
Sox5P35710 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox5P35710 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Sox5P35710 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.95■□□□□ 0.78
Sox5P35710 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.95■□□□□ 0.78
Sox5P35710 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox5P35710 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox5P35710 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms