Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RxrbP28704 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RxrbP28704 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.42■□□□□ 0.54
RxrbP28704 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RxrbP28704 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RxrbP28704 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RxrbP28704 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RxrbP28704 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RxrbP28704 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RxrbP28704 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RxrbP28704 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.42■□□□□ 0.54
RxrbP28704 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.41■□□□□ 0.54
RxrbP28704 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.41■□□□□ 0.54
RxrbP28704 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RxrbP28704 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.41■□□□□ 0.54
RxrbP28704 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.41■□□□□ 0.54
RxrbP28704 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RxrbP28704 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RxrbP28704 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.4■□□□□ 0.54
RxrbP28704 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.4■□□□□ 0.54
RxrbP28704 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.4■□□□□ 0.54
RxrbP28704 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.4■□□□□ 0.54
RxrbP28704 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RxrbP28704 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RxrbP28704 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RxrbP28704 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RxrbP28704 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RxrbP28704 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RxrbP28704 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RxrbP28704 Gm7860-201ENSMUST00000121190 879 ntBASIC18.39■□□□□ 0.53
RxrbP28704 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.39■□□□□ 0.53
RxrbP28704 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RxrbP28704 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RxrbP28704 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RxrbP28704 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RxrbP28704 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RxrbP28704 Tgds-204ENSMUST00000228543 1594 ntBASIC18.38■□□□□ 0.53
RxrbP28704 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RxrbP28704 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RxrbP28704 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RxrbP28704 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RxrbP28704 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RxrbP28704 Gm12821-201ENSMUST00000120022 600 ntBASIC18.38■□□□□ 0.53
RxrbP28704 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.38■□□□□ 0.53
RxrbP28704 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.38■□□□□ 0.53
RxrbP28704 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RxrbP28704 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.38■□□□□ 0.53
RxrbP28704 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RxrbP28704 Gm21956-201ENSMUST00000179946 522 ntBASIC18.37■□□□□ 0.53
RxrbP28704 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.37■□□□□ 0.53
RxrbP28704 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RxrbP28704 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RxrbP28704 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RxrbP28704 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Gm12251-201ENSMUST00000117893 792 ntBASIC18.36■□□□□ 0.53
RxrbP28704 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms