Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nckap1P28660 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Nckap1P28660 Gm22325-201ENSMUST00000158904 308 ntBASIC18.22■□□□□ 0.51
Nckap1P28660 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.22■□□□□ 0.51
Nckap1P28660 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Nckap1P28660 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nckap1P28660 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Gm11927-201ENSMUST00000118472 759 ntBASIC18.21■□□□□ 0.51
Nckap1P28660 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.21■□□□□ 0.51
Nckap1P28660 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.21■□□□□ 0.51
Nckap1P28660 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.21■□□□□ 0.51
Nckap1P28660 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Nckap1P28660 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.21■□□□□ 0.51
Nckap1P28660 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nckap1P28660 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nckap1P28660 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1P28660 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1P28660 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1P28660 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Nckap1P28660 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.2■□□□□ 0.5
Nckap1P28660 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.2■□□□□ 0.5
Nckap1P28660 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1P28660 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1P28660 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1P28660 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nckap1P28660 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.19■□□□□ 0.5
Nckap1P28660 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1P28660 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1P28660 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1P28660 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1P28660 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Nckap1P28660 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1P28660 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nckap1P28660 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nckap1P28660 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Gm10698-201ENSMUST00000182663 604 ntBASIC18.18■□□□□ 0.5
Nckap1P28660 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.18■□□□□ 0.5
Nckap1P28660 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Nckap1P28660 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1P28660 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.18■□□□□ 0.5
Nckap1P28660 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nckap1P28660 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nckap1P28660 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.17■□□□□ 0.5
Nckap1P28660 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.17■□□□□ 0.5
Nckap1P28660 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1P28660 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Nckap1P28660 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nckap1P28660 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.16■□□□□ 0.5
Nckap1P28660 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.16■□□□□ 0.5
Nckap1P28660 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.16■□□□□ 0.5
Nckap1P28660 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.16■□□□□ 0.5
Nckap1P28660 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1P28660 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nckap1P28660 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms