Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gja4P28235 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gja4P28235 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gja4P28235 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.37■□□□□ 0.53
Gja4P28235 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.37■□□□□ 0.53
Gja4P28235 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.37■□□□□ 0.53
Gja4P28235 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.37■□□□□ 0.53
Gja4P28235 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.37■□□□□ 0.53
Gja4P28235 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gja4P28235 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.37■□□□□ 0.53
Gja4P28235 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gja4P28235 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gja4P28235 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Gja4P28235 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gja4P28235 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gja4P28235 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gja4P28235 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Gja4P28235 Gm43799-201ENSMUST00000201845 579 ntBASIC18.36■□□□□ 0.53
Gja4P28235 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.36■□□□□ 0.53
Gja4P28235 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gja4P28235 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.36■□□□□ 0.53
Gja4P28235 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gja4P28235 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gja4P28235 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gja4P28235 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gja4P28235 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.35■□□□□ 0.53
Gja4P28235 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.35■□□□□ 0.53
Gja4P28235 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.35■□□□□ 0.53
Gja4P28235 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gja4P28235 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gja4P28235 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gja4P28235 Gm6433-201ENSMUST00000118634 875 ntBASIC18.34■□□□□ 0.53
Gja4P28235 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gja4P28235 Gm37292-201ENSMUST00000192062 758 ntBASIC18.34■□□□□ 0.53
Gja4P28235 Gm21814-202ENSMUST00000203277 873 ntBASIC18.34■□□□□ 0.53
Gja4P28235 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.34■□□□□ 0.53
Gja4P28235 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.34■□□□□ 0.53
Gja4P28235 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gja4P28235 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gja4P28235 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gja4P28235 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gja4P28235 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gja4P28235 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gja4P28235 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gja4P28235 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gja4P28235 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.33■□□□□ 0.53
Gja4P28235 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gja4P28235 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gja4P28235 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gja4P28235 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.33■□□□□ 0.52
Gja4P28235 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gja4P28235 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.33■□□□□ 0.52
Gja4P28235 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gja4P28235 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Gja4P28235 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gja4P28235 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.32■□□□□ 0.52
Gja4P28235 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gja4P28235 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.32■□□□□ 0.52
Gja4P28235 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gja4P28235 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.31■□□□□ 0.52
Gja4P28235 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gja4P28235 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms