Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nfkb1P25799 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nfkb1P25799 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nfkb1P25799 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nfkb1P25799 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nfkb1P25799 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nfkb1P25799 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.8■□□□□ 0.6
Nfkb1P25799 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nfkb1P25799 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.79■□□□□ 0.6
Nfkb1P25799 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.79■□□□□ 0.6
Nfkb1P25799 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.79■□□□□ 0.6
Nfkb1P25799 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nfkb1P25799 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nfkb1P25799 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.78■□□□□ 0.6
Nfkb1P25799 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 Gm10698-201ENSMUST00000182663 604 ntBASIC18.78■□□□□ 0.6
Nfkb1P25799 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.78■□□□□ 0.6
Nfkb1P25799 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.78■□□□□ 0.6
Nfkb1P25799 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.78■□□□□ 0.6
Nfkb1P25799 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Nfkb1P25799 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nfkb1P25799 Flg-201ENSMUST00000050758 1488 ntBASIC18.77■□□□□ 0.6
Nfkb1P25799 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nfkb1P25799 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Gm11927-201ENSMUST00000118472 759 ntBASIC18.77■□□□□ 0.6
Nfkb1P25799 Gm13158-201ENSMUST00000122007 736 ntBASIC18.77■□□□□ 0.6
Nfkb1P25799 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.77■□□□□ 0.6
Nfkb1P25799 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.77■□□□□ 0.6
Nfkb1P25799 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Nfkb1P25799 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nfkb1P25799 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.77■□□□□ 0.6
Nfkb1P25799 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nfkb1P25799 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nfkb1P25799 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Nfkb1P25799 Gm22325-201ENSMUST00000158904 308 ntBASIC18.76■□□□□ 0.59
Nfkb1P25799 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nfkb1P25799 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.76■□□□□ 0.59
Nfkb1P25799 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Nfkb1P25799 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.76■□□□□ 0.59
Nfkb1P25799 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nfkb1P25799 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.76■□□□□ 0.59
Nfkb1P25799 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nfkb1P25799 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.75■□□□□ 0.59
Nfkb1P25799 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nfkb1P25799 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nfkb1P25799 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nfkb1P25799 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nfkb1P25799 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nfkb1P25799 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Nfkb1P25799 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nfkb1P25799 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nfkb1P25799 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nfkb1P25799 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nfkb1P25799 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nfkb1P25799 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nfkb1P25799 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms