Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.27■□□□□ 0.2
P20040 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
P20040 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P20040 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.27■□□□□ 0.2
P20040 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P20040 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P20040 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
P20040 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P20040 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P20040 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.27■□□□□ 0.19
P20040 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P20040 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Gm42569-201ENSMUST00000200539 472 ntBASIC16.26■□□□□ 0.19
P20040 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P20040 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
P20040 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.25■□□□□ 0.19
P20040 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P20040 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.25■□□□□ 0.19
P20040 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
P20040 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
P20040 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.25■□□□□ 0.19
P20040 Gm10033-202ENSMUST00000211874 928 ntBASIC16.25■□□□□ 0.19
P20040 Reep4-203ENSMUST00000226563 1444 ntBASIC16.25■□□□□ 0.19
P20040 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P20040 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P20040 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P20040 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
P20040 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.24■□□□□ 0.19
P20040 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 Gm13234-201ENSMUST00000120010 747 ntBASIC16.24■□□□□ 0.19
P20040 Gm26571-201ENSMUST00000181399 666 ntBASIC16.24■□□□□ 0.19
P20040 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.24■□□□□ 0.19
P20040 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.24■□□□□ 0.19
P20040 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
P20040 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
P20040 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
P20040 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.24■□□□□ 0.19
P20040 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P20040 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.23■□□□□ 0.19
P20040 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P20040 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.23■□□□□ 0.19
P20040 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.23■□□□□ 0.19
P20040 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P20040 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
P20040 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P20040 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.22■□□□□ 0.19
P20040 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Gm10849-201ENSMUST00000100397 618 ntBASIC16.22■□□□□ 0.19
P20040 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.22■□□□□ 0.19
P20040 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.22■□□□□ 0.19
P20040 AV356131-201ENSMUST00000206201 750 ntBASIC16.22■□□□□ 0.19
P20040 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
P20040 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P20040 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P20040 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
P20040 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P20040 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P20040 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P20040 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P20040 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P20040 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.21■□□□□ 0.19
P20040 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
P20040 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms