Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kcna1P16388 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kcna1P16388 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Kcna1P16388 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kcna1P16388 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Kcna1P16388 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kcna1P16388 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kcna1P16388 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcna1P16388 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcna1P16388 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Kcna1P16388 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcna1P16388 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Kcna1P16388 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcna1P16388 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.84■□□□□ 0.93
Kcna1P16388 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Kcna1P16388 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcna1P16388 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcna1P16388 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.84■□□□□ 0.93
Kcna1P16388 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcna1P16388 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Kcna1P16388 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kcna1P16388 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcna1P16388 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.83■□□□□ 0.93
Kcna1P16388 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Kcna1P16388 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kcna1P16388 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kcna1P16388 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kcna1P16388 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kcna1P16388 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcna1P16388 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Kcna1P16388 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcna1P16388 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcna1P16388 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.82■□□□□ 0.92
Kcna1P16388 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Kcna1P16388 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.82■□□□□ 0.92
Kcna1P16388 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Kcna1P16388 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcna1P16388 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.82■□□□□ 0.92
Kcna1P16388 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Kcna1P16388 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Kcna1P16388 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kcna1P16388 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Kcna1P16388 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcna1P16388 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcna1P16388 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcna1P16388 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcna1P16388 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcna1P16388 Gm2399-201ENSMUST00000104944 225 ntBASIC20.81■□□□□ 0.92
Kcna1P16388 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Kcna1P16388 Gm11249-201ENSMUST00000117071 859 ntBASIC20.81■□□□□ 0.92
Kcna1P16388 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.81■□□□□ 0.92
Kcna1P16388 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.81■□□□□ 0.92
Kcna1P16388 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.81■□□□□ 0.92
Kcna1P16388 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.81■□□□□ 0.92
Kcna1P16388 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcna1P16388 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.81■□□□□ 0.92
Kcna1P16388 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Kcna1P16388 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Kcna1P16388 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Kcna1P16388 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Kcna1P16388 Trmt13-210ENSMUST00000198454 880 ntBASIC20.8■□□□□ 0.92
Kcna1P16388 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.8■□□□□ 0.92
Kcna1P16388 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Kcna1P16388 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcna1P16388 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kcna1P16388 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Kcna1P16388 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kcna1P16388 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Kcna1P16388 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Kcna1P16388 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.79■□□□□ 0.92
Kcna1P16388 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcna1P16388 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.79■□□□□ 0.92
Kcna1P16388 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.79■□□□□ 0.92
Kcna1P16388 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Kcna1P16388 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Kcna1P16388 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Kcna1P16388 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.78■□□□□ 0.92
Kcna1P16388 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Kcna1P16388 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Kcna1P16388 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcna1P16388 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcna1P16388 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Kcna1P16388 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcna1P16388 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.77■□□□□ 0.92
Kcna1P16388 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.77■□□□□ 0.92
Kcna1P16388 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcna1P16388 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcna1P16388 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Kcna1P16388 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Kcna1P16388 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.77■□□□□ 0.92
Kcna1P16388 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.77■□□□□ 0.92
Kcna1P16388 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms