Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp53P15975 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp53P15975 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.24■□□□□ 0.99
Usp53P15975 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp53P15975 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp53P15975 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp53P15975 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp53P15975 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.23■□□□□ 0.99
Usp53P15975 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.23■□□□□ 0.99
Usp53P15975 Mtag2-201ENSMUST00000058665 714 ntBASIC21.23■□□□□ 0.99
Usp53P15975 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
Usp53P15975 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Usp53P15975 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Usp53P15975 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Usp53P15975 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.22■□□□□ 0.99
Usp53P15975 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Usp53P15975 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Usp53P15975 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp53P15975 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Usp53P15975 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp53P15975 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp53P15975 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Usp53P15975 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp53P15975 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.2■□□□□ 0.99
Usp53P15975 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.2■□□□□ 0.99
Usp53P15975 Flg-201ENSMUST00000050758 1488 ntBASIC21.2■□□□□ 0.98
Usp53P15975 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp53P15975 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Usp53P15975 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.2■□□□□ 0.98
Usp53P15975 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp53P15975 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Usp53P15975 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.2■□□□□ 0.98
Usp53P15975 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp53P15975 Gm10812-201ENSMUST00000099864 546 ntBASIC21.2■□□□□ 0.98
Usp53P15975 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp53P15975 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp53P15975 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Usp53P15975 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.2■□□□□ 0.98
Usp53P15975 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp53P15975 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp53P15975 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Usp53P15975 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.19■□□□□ 0.98
Usp53P15975 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp53P15975 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Usp53P15975 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp53P15975 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp53P15975 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp53P15975 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp53P15975 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.18■□□□□ 0.98
Usp53P15975 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp53P15975 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.18■□□□□ 0.98
Usp53P15975 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp53P15975 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Usp53P15975 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.18■□□□□ 0.98
Usp53P15975 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp53P15975 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp53P15975 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp53P15975 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp53P15975 Gm10698-201ENSMUST00000182663 604 ntBASIC21.17■□□□□ 0.98
Usp53P15975 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Usp53P15975 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.17■□□□□ 0.98
Usp53P15975 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.17■□□□□ 0.98
Usp53P15975 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp53P15975 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp53P15975 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms