Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.27■□□□□ 0.67
Cd44P15379 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cd44P15379 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd44P15379 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.26■□□□□ 0.67
Cd44P15379 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Gm13146-201ENSMUST00000118508 780 ntBASIC19.26■□□□□ 0.67
Cd44P15379 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.26■□□□□ 0.67
Cd44P15379 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cd44P15379 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.26■□□□□ 0.67
Cd44P15379 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.26■□□□□ 0.67
Cd44P15379 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd44P15379 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cd44P15379 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Reep4-203ENSMUST00000226563 1444 ntBASIC19.25■□□□□ 0.67
Cd44P15379 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cd44P15379 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.25■□□□□ 0.67
Cd44P15379 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.25■□□□□ 0.67
Cd44P15379 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd44P15379 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cd44P15379 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.24■□□□□ 0.67
Cd44P15379 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd44P15379 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.23■□□□□ 0.67
Cd44P15379 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.23■□□□□ 0.67
Cd44P15379 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cd44P15379 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.23■□□□□ 0.67
Cd44P15379 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cd44P15379 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd44P15379 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Cd44P15379 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Tgds-204ENSMUST00000228543 1594 ntBASIC19.22■□□□□ 0.67
Cd44P15379 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd44P15379 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd44P15379 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd44P15379 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cd44P15379 Gm13534-201ENSMUST00000121169 513 ntBASIC19.21■□□□□ 0.67
Cd44P15379 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.21■□□□□ 0.67
Cd44P15379 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd44P15379 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd44P15379 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd44P15379 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd44P15379 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.2■□□□□ 0.66
Cd44P15379 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd44P15379 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms