Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Fn1P11276 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Fn1P11276 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fn1P11276 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fn1P11276 Gm43438-201ENSMUST00000198133 379 ntBASIC14.17□□□□□ -0.14
Fn1P11276 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Fn1P11276 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.17□□□□□ -0.14
Fn1P11276 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fn1P11276 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fn1P11276 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fn1P11276 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fn1P11276 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fn1P11276 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fn1P11276 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fn1P11276 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fn1P11276 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.16□□□□□ -0.14
Fn1P11276 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fn1P11276 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.16□□□□□ -0.14
Fn1P11276 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.16□□□□□ -0.14
Fn1P11276 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.15□□□□□ -0.14
Fn1P11276 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Fn1P11276 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Fn1P11276 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.15□□□□□ -0.14
Fn1P11276 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Fn1P11276 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.15□□□□□ -0.14
Fn1P11276 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Fn1P11276 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Fn1P11276 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Fn1P11276 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Fn1P11276 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.15□□□□□ -0.14
Fn1P11276 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fn1P11276 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Fn1P11276 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Fn1P11276 Gm5186-201ENSMUST00000218781 920 ntBASIC14.15□□□□□ -0.14
Fn1P11276 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Fn1P11276 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Fn1P11276 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.14□□□□□ -0.15
Fn1P11276 Gm28659-201ENSMUST00000188013 759 ntBASIC14.14□□□□□ -0.15
Fn1P11276 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fn1P11276 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Fn1P11276 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Fn1P11276 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.13□□□□□ -0.15
Fn1P11276 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Fn1P11276 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Fn1P11276 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Fn1P11276 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.13□□□□□ -0.15
Fn1P11276 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.13□□□□□ -0.15
Fn1P11276 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Fn1P11276 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Fn1P11276 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.13□□□□□ -0.15
Fn1P11276 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.13□□□□□ -0.15
Fn1P11276 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fn1P11276 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fn1P11276 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fn1P11276 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Fn1P11276 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fn1P11276 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Fn1P11276 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Fn1P11276 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fn1P11276 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms