Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim1P0C8K7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.66□□□□□ -0.38
Smim1P0C8K7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim1P0C8K7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim1P0C8K7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim1P0C8K7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smim1P0C8K7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smim1P0C8K7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.66□□□□□ -0.38
Smim1P0C8K7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smim1P0C8K7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smim1P0C8K7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smim1P0C8K7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Smim1P0C8K7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Gm43530-201ENSMUST00000195920 274 ntBASIC12.64□□□□□ -0.39
Smim1P0C8K7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.64□□□□□ -0.39
Smim1P0C8K7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smim1P0C8K7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smim1P0C8K7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Gm11687-201ENSMUST00000118911 886 ntBASIC12.62□□□□□ -0.39
Smim1P0C8K7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.62□□□□□ -0.39
Smim1P0C8K7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smim1P0C8K7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smim1P0C8K7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.61□□□□□ -0.39
Smim1P0C8K7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms