Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.35■□□□□ 0.05
Ercc1P07903 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ercc1P07903 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Ercc1P07903 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc1P07903 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ercc1P07903 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ercc1P07903 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.34■□□□□ 0.05
Ercc1P07903 Gm13241-201ENSMUST00000094493 780 ntBASIC15.34■□□□□ 0.05
Ercc1P07903 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc1P07903 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ercc1P07903 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ercc1P07903 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ercc1P07903 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc1P07903 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc1P07903 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc1P07903 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
Ercc1P07903 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ercc1P07903 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
Ercc1P07903 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ercc1P07903 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ercc1P07903 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Ercc1P07903 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.32■□□□□ 0.04
Ercc1P07903 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.32■□□□□ 0.04
Ercc1P07903 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.32■□□□□ 0.04
Ercc1P07903 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.32■□□□□ 0.04
Ercc1P07903 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.32■□□□□ 0.04
Ercc1P07903 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ercc1P07903 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc1P07903 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc1P07903 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.31■□□□□ 0.04
Ercc1P07903 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc1P07903 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ercc1P07903 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc1P07903 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc1P07903 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc1P07903 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ercc1P07903 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ercc1P07903 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.3■□□□□ 0.04
Ercc1P07903 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ercc1P07903 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.3■□□□□ 0.04
Ercc1P07903 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ercc1P07903 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Ercc1P07903 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc1P07903 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc1P07903 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc1P07903 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc1P07903 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.29■□□□□ 0.04
Ercc1P07903 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc1P07903 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.29■□□□□ 0.04
Ercc1P07903 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ercc1P07903 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Ercc1P07903 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ercc1P07903 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms