Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TnfP06804 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TnfP06804 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TnfP06804 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TnfP06804 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.47■□□□□ 0.71
TnfP06804 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.47■□□□□ 0.71
TnfP06804 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.47■□□□□ 0.71
TnfP06804 Mtag2-201ENSMUST00000058665 714 ntBASIC19.47■□□□□ 0.71
TnfP06804 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TnfP06804 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TnfP06804 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TnfP06804 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TnfP06804 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TnfP06804 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TnfP06804 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TnfP06804 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TnfP06804 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TnfP06804 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.46■□□□□ 0.71
TnfP06804 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.46■□□□□ 0.71
TnfP06804 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TnfP06804 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TnfP06804 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.46■□□□□ 0.71
TnfP06804 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TnfP06804 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TnfP06804 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TnfP06804 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TnfP06804 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TnfP06804 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.45■□□□□ 0.7
TnfP06804 Gm10698-201ENSMUST00000182663 604 ntBASIC19.45■□□□□ 0.7
TnfP06804 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TnfP06804 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.45■□□□□ 0.7
TnfP06804 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TnfP06804 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TnfP06804 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TnfP06804 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TnfP06804 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TnfP06804 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TnfP06804 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.44■□□□□ 0.7
TnfP06804 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TnfP06804 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TnfP06804 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.43■□□□□ 0.7
TnfP06804 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Gm15378-201ENSMUST00000121894 207 ntBASIC19.43■□□□□ 0.7
TnfP06804 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.43■□□□□ 0.7
TnfP06804 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.43■□□□□ 0.7
TnfP06804 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TnfP06804 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.43■□□□□ 0.7
TnfP06804 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.43■□□□□ 0.7
TnfP06804 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.43■□□□□ 0.7
TnfP06804 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.43■□□□□ 0.7
TnfP06804 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TnfP06804 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TnfP06804 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.42■□□□□ 0.7
TnfP06804 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.42■□□□□ 0.7
TnfP06804 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.42■□□□□ 0.7
TnfP06804 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TnfP06804 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TnfP06804 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TnfP06804 Gm38285-201ENSMUST00000192928 922 ntBASIC19.41■□□□□ 0.7
TnfP06804 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TnfP06804 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms