Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
P06336 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.92■□□□□ 0.3
P06336 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P06336 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
P06336 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
P06336 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P06336 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
P06336 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
P06336 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.92■□□□□ 0.3
P06336 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P06336 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
P06336 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.91■□□□□ 0.3
P06336 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Gm29257-201ENSMUST00000186115 639 ntBASIC16.91■□□□□ 0.3
P06336 Gm5408-201ENSMUST00000197998 747 ntBASIC16.91■□□□□ 0.3
P06336 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.91■□□□□ 0.3
P06336 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
P06336 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
P06336 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
P06336 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
P06336 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.9■□□□□ 0.3
P06336 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.9■□□□□ 0.3
P06336 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
P06336 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
P06336 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
P06336 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
P06336 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
P06336 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
P06336 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.89■□□□□ 0.29
P06336 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.89■□□□□ 0.29
P06336 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
P06336 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.89■□□□□ 0.29
P06336 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.89■□□□□ 0.29
P06336 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
P06336 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.88■□□□□ 0.29
P06336 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.88■□□□□ 0.29
P06336 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
P06336 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P06336 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
P06336 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P06336 Gm26524-201ENSMUST00000192339 390 ntBASIC16.88■□□□□ 0.29
P06336 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.88■□□□□ 0.29
P06336 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P06336 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
P06336 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
P06336 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.88■□□□□ 0.29
P06336 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P06336 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P06336 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P06336 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
P06336 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P06336 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
P06336 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.87■□□□□ 0.29
P06336 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P06336 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P06336 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P06336 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
P06336 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.87■□□□□ 0.29
P06336 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P06336 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P06336 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
P06336 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms